Publications
Frontiers in Microbiology, 2022
International Journal of Systematic and Evolutionary Microbiology, 2022
Bioresource Technology, 2020
Talks & Presentations
Spectra: a novel method for anaerobic fungi identification
Neurauter, M., Vinzelj, J., Strobl, S.F.A., Kappacher, C., Schlappack, T., Badzoka, J., Huck, C., Rainer, M., Podmirseg, S.M.
Third-generation sequencing to the rescue: Analysing the whole ribosomal operon to classify Neocallimastigales
Young, D.; Stüer-Patowsky, K.; Huang, L.; Flad, V.; Elshahed, M.S.; Youssef, N.; Hanafy, R.; Cheng, Y.; Moon, C.; Soni, P.; Joshi, A.; Stabel, M.; Ochsenreither, K.; Sumit, D.; Hillman, E.; Solomon, K.; Fliegerová, K.; Griffith, G.W.; Callaghan, T.M.; Podmirseg, S.M.; Sczyrba, A.; Lebuhn, M.; Wurzbacher, C.
Variation in the Syntrophic Association of Anaerobic Fungi with Rumen Methanogens
Joshi A., Soussi E., Mosberger L., Podmirseg S., Insam H., Warthmann R., Baier U.
Mastering the art of anaerobic fungi cultivation: unravelling the complexities of growth inhibitors and promoters
Joshi A., Vinzelj, J., Blattler, F., Grob, L., Mosberger, L., Nagler, M., Podmirseg, S.M., Fliegerova, K., Baier, U., Insam, H., Warthmann, R.
Screening environmental samples for anaerobic gut fungi – Development of a specific primer pair for their conjoined detection, quantification, and classification
Young, D.; Joshi, A.; Huang, L.; Munk, B.; Flad, V.; Wurzbacher, C.; Youssef, N.; Elshahed, M.S.; Moon, C.D.; Ochsenreither, K.; Sczyrba, A.; Lebuhn, M.
No Time to Die: Comparative Study on Preservation Protocols for Anaerobic Fungi
Vinzelj, J.; Joshi, A.; Young, D.; Begovic, L.; Peer, N.; Mosberger, L.; Schmid Lüdi, K.C.; Insam, H.; Flad, V.; Nagler, M.; Podmirseg, S. M.
Effect of growth media on the diversity of Neocallimastigomycetes from non-rumen habitats
Joshi, A.; Huang, L.; Young, D.; Mosberger, L.; Munk, B.; Vinzelj, J.; Flad, V.; Sczyrba, A.; Lebuhn, M.; Podmirseg, S.M.; Insam, H.; Warthmann, R.
Live and Let Die: Do Changes in the pH Value trigger Resting Stage Formation in Anaerobic Fungi?
Sonderegger, L.R.; Strobl, S.F.A.; Peer, N.; Vinzelj, J.; Wunderer, M.; Wagner, A.O.; Podmirseg, S.M.
The Complex Case of Anaerobic Fungi (Neocallimastigomycota)
Vinzelj J., Fliegerova K, Podmirseg S., Grilli D., Kvasnová S., Schierová D., Sechovcová H., Mrázek J., Siddi G., Arenas G., Moniello G.
Posters
2023
ISAM2023
Falterbaum, C.; Veitengruber, J.; Lukas, N.; Young, D.; Lebuhn, M.; Wurzbacher, C.; Flad, V.
Quantification of GH6 cellobiohydrolase transcripts as a proxy for anaerobic fungal activity?
ISAM2023, Innsbruck, AUT, 23rd-26th May 2023
2023
ISAM2023
Strobl, S.F.A.; Podmirseg, S.M.; Insam, H.; Nagler, M.
Investigating extra- and intracellular DNA patterns of anaerobic gut fungi
ISAM2023, Innsbruck, AUT, 23rd-26th May 2023
*Winner of the Best Poster Award
2023
ISAM2023
Lukas, N.; Veitengruber, J.; Gohl, C.; Lücht, M.; Steinmetz, H.; Lebuhn, M.; Flad, V.
Novel anaerobic fungi isolated from rodents of the family Caviidae
ISAM2023, Innsbruck, AUT, 23rd-26th May 2023
2023
ISAM2023
Vinzelj, J.; Karrer, M.; Stocker, S.; Ernster, N.; Podmirseg, S.M.
Making them shine: establishing HCR-FISH for anaerobic gut fungi
ISAM2023, Innsbruck, AUT, 23rd-26th May 2023
2022
ISME18
Podmirseg, S.M.; Nagler, M.; Ascher-Jenull, J.; Sint, D.; Traugott, M.
Why eDNA fractions need consideration in biomonitoring
ISME18, Lausanne, CH, 14th-19th August 2022
2021
World Microbe Forum
Vinzelj J., Fliegerova K, Podmirseg S., Grilli D., Kvasnová S., Schierová D., Sechovcová H., Mrázek J., Siddi G., Arenas G., Moniello G.
The Complex Case of Anaerobic Fungi (Neocallimastigomycota)